Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system lee muramidase etga | ARC77_RS15095 | Not Available | Positive | 2902039 - 2902497 | 17078.5 |
| type iii secretion system lee export apparatus switch protein escu | ARC77_RS15100 | Not Available | Negative | 2902494 - 2903531 | 39193.5 |
| type iii secretion system lee export apparatus protein esct | ARC77_RS15105 | Not Available | Negative | 2903524 - 2904300 | 28718.9 |
| type iii secretion system lee export apparatus protein escs | ARC77_RS15110 | Not Available | Negative | 2904300 - 2904569 | 9921.56 |
| type iii secretion system lee export apparatus protein escr | ARC77_RS15115 | Not Available | Negative | 2904569 - 2905222 | 24384.0 |
| type iii secretion system lee stator protein espl | ARC77_RS15120 | Not Available | Negative | 2905227 - 2905880 | 25459.2 |
| type iii secretion system domain-containing protein | ARC77_RS15125 | Not Available | Negative | 2905867 - 2906466 | 23475.4 |
| type iii secretion system lee chaperone cesab | ARC77_RS15130 | Not Available | Negative | 2906463 - 2906777 | 11999.4 |
| ysce family type iii secretion system co-chaperone esce | ARC77_RS15135 | Not Available | Negative | 2906790 - 2907008 | 8450.38 |
| type iii secretion system lee master regulator ler | ARC77_RS15140 | Not Available | Negative | 2907023 - 2907394 | 14331.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





