Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| intimin type gamma | ARC77_RS14995 | Not Available | Negative | 2883695 - 2886499 | 101841.0 |
| type iii secretion system lee chaperone cest | ARC77_RS15000 | Not Available | Negative | 2886559 - 2887029 | 17681.9 |
| type iii secretion system lee translocated intimin receptor tir | ARC77_RS15005 | Not Available | Negative | 2887167 - 2888843 | 58025.8 |
| type iii secretion system lee effector map (rho guanine exchange factor) | ARC77_RS15010 | Not Available | Negative | 2889267 - 2889878 | 22925.3 |
| type iii secretion system lee chaperone cesf | ARC77_RS15015 | Not Available | Positive | 2890144 - 2890527 | 14687.5 |
| type iii secretion system lee effector esph | ARC77_RS15020 | Not Available | Negative | 2890725 - 2891231 | 19283.0 |
| type iii secretion system lee ring protein escq | ARC77_RS15025 | Not Available | Negative | 2891262 - 2892179 | 34894.7 |
| type iii secretion system lee needle length regulator escp | ARC77_RS15030 | Not Available | Negative | 2892142 - 2892558 | 16548.9 |
| hypothetical protein | ARC77_RS15035 | Not Available | Negative | 2892551 - 2892871 | 12363.7 |
| type iii secretion system lee atpase escn | ARC77_RS15040 | Not Available | Negative | 2892931 - 2894271 | 48847.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





