Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| orotate phosphoribosyltransferase | ARC77_RS14790 | Not Available | Negative | 2846223 - 2846864 | 23538.3 |
| ribonuclease ph | ARC77_RS14795 | Not Available | Negative | 2846930 - 2847646 | 25313.4 |
| yicc/yloc family endoribonuclease | ARC77_RS14800 | Not Available | Positive | 2847773 - 2848636 | 33160.9 |
| dna damage-inducible protein d | ARC77_RS14805 | Not Available | Positive | 2848857 - 2849681 | 31066.6 |
| trimeric intracellular cation channel family protein | ARC77_RS14810 | Not Available | Positive | 2849973 - 2850590 | 22049.8 |
| nad-dependent dna ligase ligb | ARC77_RS14815 | Not Available | Negative | 2850587 - 2852269 | 63384.2 |
| guanylate kinase | ARC77_RS14820 | Not Available | Positive | 2852527 - 2853150 | 23652.1 |
| dna-directed rna polymerase subunit omega | ARC77_RS14825 | Not Available | Positive | 2853205 - 2853480 | 10237.2 |
| bifunctional gtp diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | ARC77_RS14830 | Not Available | Positive | 2853499 - 2855607 | 79347.1 |
| trna (guanosine(18)-2'-o)-methyltransferase trmh | ARC77_RS14835 | Not Available | Positive | 2855614 - 2856303 | 25344.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





