Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adp-glyceromanno-heptose 6-epimerase | ARC77_RS14690 | Not Available | Positive | 2828057 - 2828989 | 34895.0 |
| adp-heptose--lps heptosyltransferase rfaf | ARC77_RS14695 | Not Available | Positive | 2828999 - 2830045 | 39029.4 |
| lipopolysaccharide heptosyltransferase rfac | ARC77_RS14700 | Not Available | Positive | 2830049 - 2831041 | 36856.1 |
| o-antigen ligase rfal | ARC77_RS14705 | Not Available | Positive | 2831038 - 2832246 | 46101.8 |
| lipopolysaccharide n-acetylglucosaminyltransferase | ARC77_RS14710 | Not Available | Negative | 2832282 - 2833424 | 43610.0 |
| udp-glucose--(galactosyl) lps alpha1,2-glucosyltransferase | ARC77_RS14715 | Not Available | Negative | 2833433 - 2834446 | 40071.9 |
| lipopolysaccharide core heptose(ii) kinase rfay | ARC77_RS14720 | Not Available | Negative | 2834471 - 2835178 | 27495.7 |
| lipopolysaccharide 3-alpha-galactosyltransferase | ARC77_RS14725 | Not Available | Negative | 2835204 - 2836211 | 39417.7 |
| lipopolysaccharide core heptose(i) kinase rfap | ARC77_RS14730 | Not Available | Negative | 2836254 - 2837051 | 31034.0 |
| glycosyltransferase family 4 protein | ARC77_RS14735 | Not Available | Negative | 2837044 - 2838168 | 42511.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





