Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein yibt | ARC77_RS14590 | Not Available | Negative | 2804220 - 2804429 | 7995.76 |
| yibl family ribosome-associated protein | ARC77_RS14595 | Not Available | Positive | 2804714 - 2805076 | 13696.8 |
| duf3251 domain-containing protein | ARC77_RS14600 | Not Available | Positive | 2805634 - 2806302 | 24787.8 |
| trimeric autotransporter adhesin ehag | ARC77_RS14605 | Not Available | Positive | 2806346 - 2811112 | 160159.0 |
| l-lactate permease | ARC77_RS14610 | Not Available | Positive | 2811480 - 2813135 | 59189.5 |
| transcriptional regulator lldr | ARC77_RS14615 | Not Available | Positive | 2813135 - 2813911 | 29149.8 |
| quinone-dependent l-lactate dehydrogenase | ARC77_RS14620 | Not Available | Positive | 2813908 - 2815098 | 42760.7 |
| trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trml | ARC77_RS14625 | Not Available | Positive | 2815284 - 2815757 | 17752.3 |
| serine o-acetyltransferase | ARC77_RS14630 | Not Available | Negative | 2815810 - 2816631 | 29318.4 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | ARC77_RS14635 | Not Available | Negative | 2816711 - 2817730 | 36363.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





