Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | ARC77_RS14485 | Not Available | Positive | 2776188 - 2777588 | 51389.9 |
| glycoside hydrolase family 127 protein | ARC77_RS14490 | Not Available | Positive | 2777599 - 2779569 | 75057.9 |
| mipa/ompv family protein | ARC77_RS14495 | Not Available | Negative | 2779699 - 2780439 | 27370.9 |
| lysr family transcriptional regulator | ARC77_RS14500 | Not Available | Positive | 2780563 - 2781537 | 37301.5 |
| hlyd family secretion protein | ARC77_RS14505 | Not Available | Negative | 2781534 - 2782670 | 41772.6 |
| duf3302 domain-containing protein | ARC77_RS14510 | Not Available | Negative | 2782676 - 2782999 | 12409.3 |
| aldehyde dehydrogenase aldb | ARC77_RS14520 | Not Available | Negative | 2783544 - 2785082 | 56352.5 |
| fic family protein | ARC77_RS14525 | Not Available | Negative | 2785190 - 2786485 | 48528.1 |
| l-threonine dehydrogenase | ARC77_RS14530 | Not Available | Negative | 2786615 - 2787766 | 40312.6 |
| selenocysteine-specific translation elongation factor | ARC77_RS14535 | Not Available | Negative | 2787955 - 2789799 | 68808.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





