Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-xylose abc transporter substrate-binding protein | ARC77_RS14435 | Not Available | Positive | 2764539 - 2765531 | 35722.0 |
| d-xylose abc transporter atp-binding protein | ARC77_RS14440 | Not Available | Positive | 2765609 - 2767150 | 56443.9 |
| xylose abc transporter permease xylh | ARC77_RS14445 | Not Available | Positive | 2767128 - 2768309 | 41033.5 |
| d-xylose utilization transcriptional activator xylr | ARC77_RS14450 | Not Available | Positive | 2768387 - 2769565 | 44871.7 |
| protein bax | ARC77_RS14455 | Not Available | Negative | 2769673 - 2770497 | 30859.3 |
| alpha-amylase | ARC77_RS14460 | Not Available | Positive | 2770817 - 2772847 | 75679.4 |
| valine--pyruvate transaminase | ARC77_RS14465 | Not Available | Positive | 2773025 - 2774278 | 46689.9 |
| 4fe-4s binding protein | ARC77_RS14475 | Not Available | Negative | 2774430 - 2774903 | 17435.1 |
| duf1441 family protein | ARC77_RS31845 | Not Available | Negative | 2775005 - 2775145 | 4898.84 |
| arac family transcriptional regulator | ARC77_RS14480 | Not Available | Negative | 2775147 - 2775962 | 31525.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





