Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | ARC77_RS14340 | Not Available | Negative | 2745617 - 2746819 | 42772.2 |
| autotransporter outer membrane beta-barrel domain-containing protein | ARC77_RS14345 | Not Available | Negative | 2747048 - 2747746 | 25962.0 |
| dna-3-methyladenine glycosylase i | ARC77_RS14350 | Not Available | Positive | 2747904 - 2748467 | 21182.3 |
| n-acetyltransferase | ARC77_RS14355 | Not Available | Positive | 2748464 - 2748904 | 17173.9 |
| biotin sulfoxide reductase | ARC77_RS14360 | Not Available | Negative | 2748873 - 2751206 | 85956.4 |
| ompa family lipoprotein | ARC77_RS14365 | Not Available | Positive | 2751359 - 2752018 | 22198.6 |
| glyoxylate/hydroxypyruvate reductase ghrb | ARC77_RS14370 | Not Available | Positive | 2752122 - 2753096 | 35398.5 |
| duf3053 domain-containing protein | ARC77_RS14375 | Not Available | Negative | 2753146 - 2753856 | 25664.5 |
| hth-type transcriptional regulator | ARC77_RS14380 | Not Available | Positive | 2754290 - 2754580 | 11033.5 |
| rna chaperone/antiterminator cspa | ARC77_RS14385 | Not Available | Positive | 2754861 - 2755073 | 7403.66 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





