Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | ARC77_RS14165 | Not Available | Positive | 2704134 - 2705456 | 47240.9 |
| asma family protein | ARC77_RS14170 | Not Available | Negative | 2705638 - 2707698 | 74443.8 |
| cyclic-guanylate-specific phosphodiesterase | ARC77_RS14175 | Not Available | Negative | 2707768 - 2708535 | 29574.9 |
| 2-dehydro-3-deoxygluconokinase | ARC77_RS14185 | Not Available | Positive | 2708767 - 2709696 | 33949.2 |
| pitrilysin family protein | ARC77_RS14190 | Not Available | Negative | 2709792 - 2711288 | 55502.4 |
| c4-dicarboxylate transporter dctc | ARC77_RS14195 | Not Available | Negative | 2711509 - 2712795 | 45411.1 |
| biofilm formation regulator hmsp | ARC77_RS14200 | Not Available | Negative | 2712978 - 2714966 | 74525.0 |
| cellulose synthase complex outer membrane protein bcsc | ARC77_RS14205 | Not Available | Negative | 2715048 - 2718521 | 127729.0 |
| cellulose synthase complex periplasmic endoglucanase bcsz | ARC77_RS14210 | Not Available | Negative | 2718503 - 2719609 | 41762.5 |
| cellulose biosynthesis cyclic di-gmp-binding regulatory protein bcsb | ARC77_RS14215 | Not Available | Negative | 2719616 - 2721991 | 87247.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





