Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme utilization cystosolic carrier protein hutx | ARC77_RS14065 | Not Available | Positive | 2681623 - 2682117 | 18329.8 |
| anaerobilin reductase | ARC77_RS14070 | Not Available | Positive | 2682117 - 2682740 | 21813.1 |
| heme abc transporter permease shuu/chuu | ARC77_RS14075 | Not Available | Positive | 2682789 - 2683781 | 35353.8 |
| heme abc transporter atp-binding protein | ARC77_RS14080 | Not Available | Positive | 2683778 - 2684548 | 28877.9 |
| mgtc/sapb family protein | ARC77_RS14085 | Not Available | Negative | 2684600 - 2685247 | 23214.9 |
| acid-activated periplasmic chaperone hdeb | ARC77_RS14090 | Not Available | Negative | 2685311 - 2685637 | 12043.5 |
| acid-activated periplasmic chaperone hdea | ARC77_RS14095 | Not Available | Negative | 2685753 - 2686085 | 11858.2 |
| acid-resistance protein hded | ARC77_RS14100 | Not Available | Positive | 2686340 - 2686912 | 20904.6 |
| acid resistance transcriptional activator gade | ARC77_RS14105 | Not Available | Positive | 2687711 - 2688238 | 20600.6 |
| hypothetical protein | ARC77_RS14110 | Not Available | Negative | 2688239 - 2688517 | 9789.79 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





