Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| universal stress protein uspb | ARC77_RS13965 | Not Available | Negative | 2660907 - 2661242 | 13028.1 |
| universal stress protein uspa | ARC77_RS13970 | Not Available | Positive | 2661633 - 2662067 | 16067.3 |
| hypothetical protein | ARC77_RS33595 | Not Available | Negative | 2662134 - 2662187 | 1988.45 |
| hypothetical protein | ARC77_RS33825 | Not Available | Negative | 2662165 - 2662218 | 1948.4 |
| dipeptide/tripeptide permease dtpb | ARC77_RS13975 | Not Available | Positive | 2662384 - 2663853 | 53580.4 |
| 16s rrna (guanine(1516)-n(2))-methyltransferase rsmj | ARC77_RS13980 | Not Available | Negative | 2663902 - 2664654 | 26950.8 |
| oligopeptidase a | ARC77_RS13985 | Not Available | Negative | 2664662 - 2666704 | 77199.4 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase | ARC77_RS13990 | Not Available | Positive | 2666907 - 2667749 | 31988.5 |
| glutathione-disulfide reductase | ARC77_RS13995 | Not Available | Positive | 2667821 - 2669173 | 48741.3 |
| damage-inducible type i toxin dinq | ARC77_RS14000 | Not Available | Negative | 2669227 - 2669310 | 3021.06 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





