Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system hica family toxin | ARC77_RS13910 | Not Available | Negative | 2647018 - 2647293 | 10200.5 |
| abc transporter permease | ARC77_RS13915 | Not Available | Negative | 2647366 - 2648490 | 41076.3 |
| ribosome-associated atpase/putative transporter rbba | ARC77_RS13920 | Not Available | Negative | 2648490 - 2651225 | 100789.0 |
| hlyd family secretion protein | ARC77_RS13925 | Not Available | Negative | 2651222 - 2652289 | 38788.5 |
| protein yhiy | ARC77_RS33590 | Not Available | Negative | 2652352 - 2652465 | 4153.4 |
| duf4049 domain-containing protein | ARC77_RS13930 | Not Available | Negative | 2652655 - 2654277 | 61226.8 |
| duf4049 domain-containing protein | ARC77_RS13935 | Not Available | Negative | 2654539 - 2656149 | 61810.0 |
| duf2776 domain-containing protein | ARC77_RS13950 | Not Available | Positive | 2656533 - 2657585 | 37659.3 |
| nad(p)/fad-dependent oxidoreductase | ARC77_RS13955 | Not Available | Negative | 2657903 - 2659105 | 43711.6 |
| inorganic phosphate transporter pita | ARC77_RS13960 | Not Available | Positive | 2659337 - 2660836 | 53392.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





