Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3261 domain-containing protein | ARC77_RS13810 | Not Available | Positive | 2630609 - 2631193 | 21412.9 |
| beta-ketoacyl-[acyl-carrier-protein] synthase family protein | ARC77_RS13815 | Not Available | Positive | 2631195 - 2632364 | 41123.2 |
| 3-hydroxy-fatty acyl-acp dehydratase | ARC77_RS13820 | Not Available | Positive | 2632361 - 2632825 | 16621.8 |
| 3-ketoacyl-acp reductase fabg2 | ARC77_RS13825 | Not Available | Positive | 2632825 - 2633556 | 25671.1 |
| beta-ketoacyl-acp synthase | ARC77_RS13830 | Not Available | Positive | 2633553 - 2634782 | 44150.3 |
| 4'-phosphopantetheinyl transferase acpt | ARC77_RS13835 | Not Available | Positive | 2634784 - 2635371 | 21738.9 |
| nickel abc transporter substrate-binding protein | ARC77_RS13840 | Not Available | Positive | 2635482 - 2637056 | 58728.2 |
| nickel abc transporter permease subunit nikb | ARC77_RS13845 | Not Available | Positive | 2637056 - 2638000 | 35294.4 |
| nickel abc transporter permease subunit nikc | ARC77_RS13850 | Not Available | Positive | 2637997 - 2638830 | 30363.8 |
| nickel import atp-binding protein nikd | ARC77_RS13855 | Not Available | Positive | 2638830 - 2639594 | 26792.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





