Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | ARC77_RS04520 | Not Available | Positive | 840401 - 840766 | 13771.5 |
| Replication protein | ARC77_RS04525 | Not Available | Positive | 840773 - 843595 | 107181.0 |
| Recombinase | ARC77_RS04530 | Not Available | Positive | 843672 - 844631 | 34969.8 |
| Plasmid partitioning/stability family protein | ARC77_RS04535 | Not Available | Positive | 844636 - 844950 | 11895.2 |
| Putative transposase orfa protein of is629 | ARC77_RS04540 | Not Available | Negative | 844982 - 845985 | 37952.6 |
| Qin prophage | ARC77_RS04550 | Not Available | Positive | 846042 - 846572 | 19173.2 |
| Serine acetyltransferase | ARC77_RS04555 | Not Available | Negative | 846616 - 847188 | 21514.6 |
| Tail protein | ARC77_RS04560 | Not Available | Negative | 847345 - 847833 | 18302.9 |
| Tail tape measure protein | ARC77_RS04565 | Not Available | Negative | 847846 - 850649 | 103169.0 |
| Gpe family tail protein | ARC77_RS32505 | Not Available | Negative | 850636 - 850791 | 5805.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





