Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4153 domain-containing protein | ARC77_RS13350 | Not Available | Negative | 2530122 - 2531846 | 64910.4 |
| phosphoenolpyruvate carboxykinase (atp) | ARC77_RS13360 | Not Available | Positive | 2532225 - 2533847 | 59648.7 |
| two-component system sensor histidine kinase envz | ARC77_RS13365 | Not Available | Negative | 2533923 - 2535275 | 50367.1 |
| two-component system response regulator ompr | ARC77_RS13370 | Not Available | Negative | 2535272 - 2535991 | 27355.3 |
| transcription elongation factor greb | ARC77_RS13375 | Not Available | Positive | 2536219 - 2536695 | 18546.1 |
| tex family protein | ARC77_RS13380 | Not Available | Positive | 2536792 - 2539113 | 85017.5 |
| ferrous iron transporter a | ARC77_RS13385 | Not Available | Positive | 2539551 - 2539778 | 8371.31 |
| fe(2+) transporter permease subunit feob | ARC77_RS13390 | Not Available | Positive | 2539795 - 2542116 | 84448.7 |
| [fe-s]-dependent transcriptional repressor feoc | ARC77_RS13395 | Not Available | Positive | 2542116 - 2542352 | 8660.66 |
| recombination-promoting nuclease rpna | ARC77_RS13400 | Not Available | Positive | 2542555 - 2543433 | 33337.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





