Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfurtransferase complex subunit tusc | ARC77_RS13090 | Not Available | Negative | 2482102 - 2482461 | 13145.8 |
| sulfurtransferase complex subunit tusd | ARC77_RS13095 | Not Available | Negative | 2482461 - 2482847 | 13680.2 |
| transcriptional regulator | ARC77_RS13100 | Not Available | Negative | 2482847 - 2483569 | 26836.2 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | ARC77_RS13105 | Not Available | Negative | 2483736 - 2484548 | 28913.4 |
| protein slyx | ARC77_RS13110 | Not Available | Positive | 2484769 - 2484987 | 8214.8 |
| peptidylprolyl isomerase | ARC77_RS13115 | Not Available | Negative | 2485036 - 2485626 | 20854.1 |
| yhev family putative zinc ribbon protein | ARC77_RS13120 | Not Available | Negative | 2485721 - 2485921 | 7599.17 |
| glutathione-regulated potassium-efflux system protein kefb | ARC77_RS13125 | Not Available | Negative | 2485958 - 2487736 | 65309.2 |
| glutathione-regulated potassium-efflux system ancillary protein kefg | ARC77_RS13130 | Not Available | Negative | 2487736 - 2488287 | 20827.9 |
| abc transporter atp-binding protein | ARC77_RS13135 | Not Available | Positive | 2488418 - 2490331 | 71847.6 |
Pathways
417 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





