Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large-conductance mechanosensitive channel protein mscl | ARC77_RS12885 | Not Available | Positive | 2460259 - 2460669 | 14957.7 |
| alternative ribosome-rescue factor arfa | ARC77_RS12890 | Not Available | Negative | 2460666 - 2460884 | 8171.86 |
| zn(2+)-responsive transcriptional regulator | ARC77_RS12895 | Not Available | Negative | 2460940 - 2461365 | 16180.4 |
| duf1992 domain-containing protein | ARC77_RS12900 | Not Available | Negative | 2461376 - 2461744 | 13944.6 |
| 50s ribosomal protein l17 | ARC77_RS12905 | Not Available | Negative | 2461851 - 2462234 | 14365.4 |
| dna-directed rna polymerase subunit alpha | ARC77_RS12910 | Not Available | Negative | 2462275 - 2463264 | 36513.9 |
| 30s ribosomal protein s4 | ARC77_RS12915 | Not Available | Negative | 2463290 - 2463910 | 23470.5 |
| 30s ribosomal protein s11 | ARC77_RS12920 | Not Available | Negative | 2463944 - 2464333 | 13845.7 |
| 30s ribosomal protein s13 | ARC77_RS12925 | Not Available | Negative | 2464350 - 2464706 | 13100.2 |
| 50s ribosomal protein l36 | ARC77_RS12930 | Not Available | Negative | 2464853 - 2464969 | 4364.59 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





