Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf72 domain-containing protein | ARC77_RS04250 | Not Available | Positive | 794717 - 795514 | 30362.3 |
| mapeg family protein | ARC77_RS04255 | Not Available | Positive | 795567 - 795962 | 15227.2 |
| Trna (cmo5u34)-methyltransferase | ARC77_RS04260 | Not Available | Positive | 796003 - 796746 | 27792.3 |
| Upf0149 family protein yeca | ARC77_RS04440 | Not Available | Negative | 833477 - 834142 | 24982.5 |
| Attl | Not Available | Not Available | Positive | 834330 - 834392 | Not Available |
| Integrase | ARC77_RS04445 | Not Available | Negative | 834499 - 835500 | 37806.8 |
| duf2511 domain-containing protein | ARC77_RS04450 | Not Available | Negative | 835506 - 835853 | 12859.5 |
| Flagella biosynthesis regulator flk | ARC77_RS04455 | Not Available | Negative | 835883 - 836533 | 24184.8 |
| Transcriptional regulator | ARC77_RS04460 | Not Available | Negative | 836549 - 836953 | 14858.6 |
| hypothetical protein | ARC77_RS32490 | Not Available | Negative | 837043 - 837180 | 4841.89 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





