Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase factor sigma-54 | ARC77_RS12460 | Not Available | Positive | 2374291 - 2375724 | 53996.8 |
| ribosome hibernation promoting factor | ARC77_RS12465 | Not Available | Positive | 2375747 - 2376034 | 10750.9 |
| pts iia-like nitrogen regulatory protein ptsn | ARC77_RS12470 | Not Available | Positive | 2376152 - 2376643 | 17959.7 |
| rnase adapter rapz | ARC77_RS12475 | Not Available | Positive | 2376689 - 2377543 | 32494.2 |
| pts phosphocarrier protein npr | ARC77_RS12480 | Not Available | Positive | 2377540 - 2377812 | 9810.71 |
| phop regulatory network protein yrbl | ARC77_RS12485 | Not Available | Positive | 2378026 - 2378658 | 24302.3 |
| monofunctional biosynthetic peptidoglycan transglycosylase | ARC77_RS12490 | Not Available | Negative | 2378655 - 2379383 | 27270.0 |
| isoprenoid biosynthesis glyoxalase elbb | ARC77_RS12495 | Not Available | Negative | 2379380 - 2380033 | 23052.0 |
| aerobic respiration two-component sensor histidine kinase arcb | ARC77_RS12500 | Not Available | Negative | 2380263 - 2382599 | 88015.1 |
| tigr01212 family radical sam protein | ARC77_RS12505 | Not Available | Negative | 2382695 - 2383624 | 34608.6 |
Pathways
549 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





