Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein/nucleic acid deglycase | ARC77_RS12210 | Not Available | Positive | 2328693 - 2329211 | 18859.4 |
| yhbp family protein | ARC77_RS12215 | Not Available | Negative | 2329191 - 2329634 | 16788.3 |
| dna damage response exodeoxyribonuclease yhbq | ARC77_RS12220 | Not Available | Positive | 2329685 - 2329987 | 11241.6 |
| gnat family n-acetyltransferase | ARC77_RS12225 | Not Available | Negative | 2329974 - 2330477 | 18534.8 |
| scp2 domain-containing protein | ARC77_RS12230 | Not Available | Negative | 2330471 - 2330995 | 19673.0 |
| peptidase u32 family protein | ARC77_RS12235 | Not Available | Positive | 2331204 - 2332199 | 37035.2 |
| u32 family peptidase | ARC77_RS12240 | Not Available | Positive | 2332208 - 2333086 | 32523.1 |
| llm class flavin-dependent oxidoreductase | ARC77_RS12245 | Not Available | Positive | 2333167 - 2334174 | 37073.4 |
| tryptophan permease | ARC77_RS12250 | Not Available | Negative | 2334291 - 2335535 | 44423.2 |
| atp-dependent rna helicase dead | ARC77_RS12260 | Not Available | Negative | 2335689 - 2337578 | 70580.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





