Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc transporter zupt | ARC77_RS11650 | Not Available | Positive | 2217294 - 2218067 | 26486.5 |
| protein yqid | ARC77_RS33380 | Not Available | Negative | 2218125 - 2218295 | 6838.37 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | ARC77_RS11660 | Not Available | Negative | 2218557 - 2219210 | 23354.9 |
| ubiquinone biosynthesis accessory factor ubik | ARC77_RS11665 | Not Available | Positive | 2219584 - 2219883 | 11389.7 |
| cell surface composition regulator glgs | ARC77_RS11670 | Not Available | Negative | 2219918 - 2220118 | 7922.34 |
| ob-fold-containig protein | ARC77_RS11675 | Not Available | Positive | 2220387 - 2221001 | 22489.7 |
| flotillin family protein | ARC77_RS11680 | Not Available | Positive | 2221043 - 2222704 | 60686.3 |
| type i toxin-antitoxin system ibs family toxin | ARC77_RS32775 | Not Available | Positive | 2222943 - 2223002 | 2150.99 |
| type i toxin-antitoxin system toxin ibse | ARC77_RS29850 | Not Available | Positive | 2223319 - 2223378 | 2207.06 |
| bifunctional d-glycero-beta-d-manno-heptose-7-phosphate kinase/d-glycero-beta-d-manno-heptose 1-phosphate adenylyltransferase hlde | ARC77_RS11695 | Not Available | Negative | 2223498 - 2224931 | 51067.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





