Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2623 family protein yghw | ARC77_RS11430 | Not Available | Negative | 2175453 - 2175740 | 10946.1 |
| yghx family hydrolase | ARC77_RS11435 | Not Available | Negative | 2175859 - 2176746 | 32671.8 |
| l-glyceraldehyde 3-phosphate reductase | ARC77_RS11440 | Not Available | Positive | 2176903 - 2177943 | 38817.3 |
| tigr00645 family protein | ARC77_RS11445 | Not Available | Negative | 2177983 - 2178477 | 18642.3 |
| nadp(+)-dependent aldehyde reductase | ARC77_RS11450 | Not Available | Positive | 2178668 - 2179552 | 31489.7 |
| tonb system transport protein exbd | ARC77_RS11455 | Not Available | Negative | 2179824 - 2180249 | 15527.9 |
| tol-pal system-associated acyl-coa thioesterase | ARC77_RS11460 | Not Available | Negative | 2180256 - 2180990 | 26289.0 |
| cystathionine beta-lyase | ARC77_RS11470 | Not Available | Positive | 2181242 - 2182429 | 43219.8 |
| deda family general envelope maintenance protein yghb | ARC77_RS11475 | Not Available | Positive | 2182569 - 2183228 | 24135.3 |
| dna-binding transcriptional regulator yqhc | ARC77_RS11480 | Not Available | Negative | 2183268 - 2184167 | 33759.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





