Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ARC77_RS33375 | Not Available | Negative | 2147599 - 2147772 | 5513.67 |
| transposase dna-binding-containing protein | ARC77_RS33795 | Not Available | Positive | 2147950 - 2148153 | 7294.68 |
| hypothetical protein | ARC77_RS33800 | Not Available | Negative | 2148085 - 2148318 | 8415.19 |
| is4 family transposase | ARC77_RS31770 | Not Available | Positive | 2148328 - 2149218 | 34288.9 |
| duf1441 family protein | ARC77_RS33805 | Not Available | Positive | 2149452 - 2150015 | 21465.3 |
| type iii secretion system effector espl2 | ARC77_RS11285 | Not Available | Positive | 2150006 - 2151655 | 62159.2 |
| duf1441 family protein | ARC77_RS32750 | Not Available | Positive | 2151873 - 2152022 | 6019.71 |
| type iii secretion system effector arginine glycosyltransferase nleb | ARC77_RS11290 | Not Available | Positive | 2152263 - 2153252 | 37644.7 |
| type iii secretion system effector cysteine methyltransferase nlee | ARC77_RS11295 | Not Available | Positive | 2153301 - 2153975 | 26059.2 |
| duf1441 family protein | ARC77_RS11300 | Not Available | Positive | 2154353 - 2155330 | 37795.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





