Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 2025963 - 2026036 | Not Available |
| amidase activator acts | ARC77_RS10675 | Not Available | Negative | 2026115 - 2026870 | 26540.0 |
| xanthine dehydrogenase molybdenum-binding subunit xdha | ARC77_RS10680 | Not Available | Positive | 2027286 - 2029583 | 82708.0 |
| xanthine dehydrogenase fad-binding subunit xdhb | ARC77_RS10685 | Not Available | Positive | 2029594 - 2030472 | 31562.6 |
| xanthine dehydrogenase iron sulfur-binding subunit xdhc | ARC77_RS10690 | Not Available | Positive | 2030469 - 2030948 | 16950.8 |
| sigma-54-dependent fis family transcriptional regulator | ARC77_RS10695 | Not Available | Negative | 2030988 - 2032766 | 66094.0 |
| knotted carbamoyltransferase ygew | ARC77_RS10700 | Not Available | Positive | 2033245 - 2034432 | 44057.7 |
| diaminopropionate ammonia-lyase | ARC77_RS10705 | Not Available | Positive | 2034490 - 2035686 | 43330.1 |
| ygey family selenium metabolism-linked hydrolase | ARC77_RS10710 | Not Available | Positive | 2035744 - 2036955 | 44806.4 |
| d-phenylhydantoinase | ARC77_RS10715 | Not Available | Positive | 2037008 - 2038393 | 51046.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





