Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system needle length determinant, span/eivj family | ARC77_RS31730 | Not Available | Negative | 2015251 - 2015820 | 22345.3 |
| hypothetical protein | ARC77_RS33780 | Not Available | Negative | 2015893 - 2016126 | 8693.38 |
| type iii secretion protein | ARC77_RS10625 | Not Available | Negative | 2016104 - 2016562 | 18332.4 |
| type iii secretion system atpase sctn | ARC77_RS10630 | Not Available | Negative | 2016552 - 2017844 | 47602.4 |
| duf1441 family protein | ARC77_RS10635 | Not Available | Negative | 2017876 - 2019940 | 75465.9 |
| yopn/lcre/inve/mxic type iii secretion system gatekeeper | ARC77_RS10640 | Not Available | Negative | 2019933 - 2021078 | 43647.8 |
| type iii secretion system outer membrane ring subunit sctc | ARC77_RS10645 | Not Available | Negative | 2021083 - 2022786 | 62797.5 |
| helix-turn-helix domain-containing protein | ARC77_RS10650 | Not Available | Negative | 2022783 - 2023532 | 28286.4 |
| ghot/ortt family toxin | ARC77_RS10655 | Not Available | Negative | 2023878 - 2024057 | 6642.54 |
| duf1441 family protein | ARC77_RS10660 | Not Available | Negative | 2024124 - 2025729 | 57919.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





