Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinose-proton symporter arae | ARC77_RS10460 | Not Available | Negative | 1991810 - 1993228 | 51717.6 |
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdud | ARC77_RS10465 | Not Available | Negative | 1993543 - 1994304 | 27042.7 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | ARC77_RS10470 | Not Available | Negative | 1994334 - 1995170 | 31092.2 |
| acetyl-coa c-acetyltransferase | ARC77_RS10475 | Not Available | Negative | 1995457 - 1996638 | 40988.1 |
| amino acid permease | ARC77_RS10480 | Not Available | Positive | 1996893 - 1998122 | 45101.9 |
| helix-turn-helix transcriptional regulator | ARC77_RS10485 | Not Available | Positive | 1998582 - 1999214 | 24391.3 |
| transcriptional regulator | ARC77_RS10490 | Not Available | Positive | 1999548 - 2000357 | 30788.9 |
| protein yqej | ARC77_RS10495 | Not Available | Positive | 2000354 - 2000833 | 18542.4 |
| hypothetical protein | ARC77_RS31715 | Not Available | Negative | 2000866 - 2000946 | 3203.84 |
| protein yqek | ARC77_RS10500 | Not Available | Negative | 2000982 - 2001407 | 16240.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





