Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fucose isomerase | ARC77_RS10255 | Not Available | Positive | 1946629 - 1948404 | 64966.2 |
| l-fuculokinase | ARC77_RS10260 | Not Available | Positive | 1948513 - 1949931 | 52275.7 |
| l-fucose mutarotase | ARC77_RS10265 | Not Available | Positive | 1949933 - 1950355 | 15474.0 |
| l-fucose operon activator | ARC77_RS10270 | Not Available | Positive | 1950413 - 1951144 | 27349.7 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | ARC77_RS10275 | Not Available | Negative | 1951188 - 1952288 | 41907.5 |
| duf423 domain-containing protein | ARC77_RS10280 | Not Available | Negative | 1952281 - 1952676 | 14334.0 |
| glycine cleavage system transcriptional regulator gcva | ARC77_RS10285 | Not Available | Negative | 1952695 - 1953612 | 34403.4 |
| ygdi/ygdr family lipoprotein | ARC77_RS10290 | Not Available | Negative | 1953963 - 1954190 | 8174.67 |
| cysteine desulfurase csda | ARC77_RS10295 | Not Available | Positive | 1954382 - 1955587 | 43255.6 |
| cysteine desulfurase sulfur acceptor subunit csde | ARC77_RS10300 | Not Available | Positive | 1955587 - 1956030 | 15941.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





