Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yqcc family protein | ARC77_RS10200 | Not Available | Negative | 1934829 - 1935158 | 12772.2 |
| secy-interacting protein | ARC77_RS10210 | Not Available | Negative | 1935780 - 1936325 | 20719.6 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | ARC77_RS10215 | Not Available | Positive | 1936393 - 1937241 | 32551.1 |
| nucleotide 5'-monophosphate nucleosidase ppnn | ARC77_RS10220 | Not Available | Positive | 1937353 - 1938717 | 50975.0 |
| haaap family serine/threonine permease sdac | ARC77_RS10225 | Not Available | Positive | 1939274 - 1940563 | 46909.2 |
| l-serine ammonia-lyase ii | ARC77_RS10230 | Not Available | Positive | 1940621 - 1941988 | 48672.8 |
| flap endonuclease xni | ARC77_RS10235 | Not Available | Positive | 1942100 - 1942855 | 28167.7 |
| lactaldehyde reductase | ARC77_RS10240 | Not Available | Negative | 1942910 - 1944058 | 40515.7 |
| l-fuculose-phosphate aldolase | ARC77_RS10245 | Not Available | Negative | 1944086 - 1944733 | 23786.7 |
| l-fucose:h+ symporter permease | ARC77_RS10250 | Not Available | Positive | 1945280 - 1946596 | 47577.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





