Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i-e crispr-associated endonuclease cas1e | ARC77_RS09995 | Not Available | Negative | 1887466 - 1888389 | 33425.8 |
| type i-e crispr-associated protein cas6/cse3/case | ARC77_RS10000 | Not Available | Negative | 1888386 - 1889036 | 24817.8 |
| type i-e crispr-associated protein cas5/casd | ARC77_RS10005 | Not Available | Negative | 1889018 - 1889764 | 28621.0 |
| type i-e crispr-associated protein cas7/cse4/casc | ARC77_RS10010 | Not Available | Negative | 1889775 - 1890830 | 38404.6 |
| type i-e crispr-associated protein cse2/casb | ARC77_RS10015 | Not Available | Negative | 1890842 - 1891378 | 20861.9 |
| type i-e crispr-associated protein cse1/casa | ARC77_RS10020 | Not Available | Negative | 1891375 - 1892937 | 59060.4 |
| crispr-associated helicase/endonuclease cas3 | ARC77_RS10025 | Not Available | Negative | 1893035 - 1895734 | 101883.0 |
| hok/gef family protein | ARC77_RS10030 | Not Available | Negative | 1895926 - 1896078 | 5559.11 |
| phosphoadenosine phosphosulfate reductase | ARC77_RS10035 | Not Available | Negative | 1896342 - 1897076 | 27953.3 |
| assimilatory sulfite reductase (nadph) hemoprotein subunit | ARC77_RS10040 | Not Available | Negative | 1897150 - 1898862 | 63963.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





