Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux transporter emrab transcriptional repressor emrr | ARC77_RS09640 | Not Available | Positive | 1823364 - 1823894 | 20564.7 |
| multidrug efflux mfs transporter periplasmic adaptor subunit emra | ARC77_RS09645 | Not Available | Positive | 1824021 - 1825193 | 42739.5 |
| multidrug efflux mfs transporter permease subunit emrb | ARC77_RS09650 | Not Available | Positive | 1825210 - 1826748 | 55627.7 |
| s-ribosylhomocysteine lyase | ARC77_RS09655 | Not Available | Negative | 1826812 - 1827327 | 19445.4 |
| glutamate--cysteine ligase | ARC77_RS09660 | Not Available | Negative | 1827477 - 1829033 | 58258.5 |
| yqaa family protein | ARC77_RS09665 | Not Available | Negative | 1829106 - 1829534 | 15546.6 |
| fructose-1-phosphate/6-phosphogluconate phosphatase | ARC77_RS09670 | Not Available | Negative | 1829531 - 1830097 | 20848.1 |
| Trna-arg | Not Available | Not Available | Positive | 1830378 - 1830454 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 1830557 - 1830633 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 1830696 - 1830772 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





