Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system effector zinc metalloprotease nlec | ARC77_RS03970 | Not Available | Negative | 750498 - 751511 | 37784.9 |
| Tail protein | ARC77_RS03975 | Not Available | Negative | 751914 - 752183 | 10004.3 |
| Putative tail fiber protein | ARC77_RS03980 | Not Available | Negative | 752185 - 753498 | 44163.2 |
| Outer membrane protein lom precursor | ARC77_RS03985 | Not Available | Negative | 753563 - 754162 | 21865.3 |
| Phage-related tail protein | ARC77_RS03990 | Not Available | Negative | 754230 - 757706 | 126430.0 |
| Putative tail component | ARC77_RS03995 | Not Available | Negative | 757953 - 758534 | 20332.6 |
| Putative tail assembly protein | ARC77_RS04000 | Not Available | Negative | 758531 - 759274 | 28057.2 |
| Phage minor tail protein l | ARC77_RS04005 | Not Available | Negative | 759285 - 759983 | 25705.2 |
| Putative minor tail protein | ARC77_RS04010 | Not Available | Negative | 759983 - 760312 | 12615.2 |
| Putative tail length tape measure protein precursor | ARC77_RS04015 | Not Available | Negative | 760309 - 762954 | 94567.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





