Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase 4 subunit hyfa | ARC77_RS08675 | Not Available | Positive | 1622983 - 1623600 | 22258.6 |
| hydrogenase 4 subunit b | ARC77_RS08680 | Not Available | Positive | 1623600 - 1625618 | 72663.5 |
| hydrogenase 4 subunit hyfc | ARC77_RS08685 | Not Available | Positive | 1625629 - 1626576 | 34274.3 |
| hydrogenase 4 subunit hyfd | ARC77_RS08690 | Not Available | Positive | 1626593 - 1628032 | 51801.8 |
| hydrogenase 4 membrane subunit | ARC77_RS08695 | Not Available | Positive | 1628044 - 1628694 | 23363.0 |
| hydrogenase 4 subunit f | ARC77_RS08700 | Not Available | Positive | 1628699 - 1630279 | 56641.4 |
| hydrogenase 4 catalytic subunit hyfg | ARC77_RS08705 | Not Available | Positive | 1630269 - 1631984 | 64991.0 |
| hydrogenase 4 subunit h | ARC77_RS08710 | Not Available | Positive | 1631994 - 1632539 | 20130.4 |
| hydrogenase 4 catalytic subunit hyfi | ARC77_RS08715 | Not Available | Positive | 1632536 - 1633294 | 28073.9 |
| hydrogenase 4 assembly chaperone hyfj | ARC77_RS08720 | Not Available | Positive | 1633287 - 1633700 | 15592.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





