Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyl-diaminopimelate desuccinylase | ARC77_RS08620 | Not Available | Positive | 1613418 - 1614545 | 41243.3 |
| ypfn family protein | ARC77_RS08625 | Not Available | Positive | 1614573 - 1614773 | 8071.78 |
| esterase | ARC77_RS08630 | Not Available | Negative | 1614854 - 1615552 | 24801.4 |
| trna cytosine(34) acetyltransferase tmca | ARC77_RS08635 | Not Available | Negative | 1615626 - 1617641 | 74795.5 |
| neutral zinc metallopeptidase | ARC77_RS08640 | Not Available | Negative | 1617656 - 1618519 | 31462.0 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | ARC77_RS08645 | Not Available | Negative | 1618687 - 1619400 | 26996.5 |
| outer membrane protein assembly factor bamc | ARC77_RS08655 | Not Available | Negative | 1619613 - 1620647 | 36826.4 |
| 4-hydroxy-tetrahydrodipicolinate synthase | ARC77_RS08660 | Not Available | Negative | 1620664 - 1621542 | 31285.9 |
| glycine cleavage system transcriptional repressor | ARC77_RS08665 | Not Available | Positive | 1621688 - 1622260 | 20769.8 |
| thioredoxin-dependent thiol peroxidase | ARC77_RS08670 | Not Available | Positive | 1622260 - 1622730 | 17634.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





