Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent oxaloacetate-decarboxylating malate dehydrogenase | ARC77_RS08570 | Not Available | Negative | 1597909 - 1600188 | 82432.2 |
| transaldolase | ARC77_RS08575 | Not Available | Positive | 1600477 - 1601427 | 35660.7 |
| transketolase | ARC77_RS08580 | Not Available | Positive | 1601447 - 1603450 | 73032.7 |
| duf1176 domain-containing protein | ARC77_RS08585 | Not Available | Negative | 1603545 - 1604588 | 38819.6 |
| gdp-mannose pyrophosphatase nudk | ARC77_RS08590 | Not Available | Negative | 1604714 - 1605289 | 21746.0 |
| formate-dependent uric acid utilization protein aega | ARC77_RS08595 | Not Available | Negative | 1605357 - 1607336 | 71816.1 |
| nitrate/nitrite two-component system sensor histidine kinase narq | ARC77_RS08600 | Not Available | Positive | 1607542 - 1609242 | 63588.6 |
| multidrug efflux rnd transporter permease acrd | ARC77_RS08605 | Not Available | Positive | 1609406 - 1612519 | 113026.0 |
| protein ypfm | ARC77_RS31685 | Not Available | Negative | 1612618 - 1612677 | 2408.02 |
| arsc family reductase | ARC77_RS08615 | Not Available | Positive | 1613058 - 1613414 | 13500.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





