Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate/thiosulfate abc transporter permease cyst | ARC77_RS08420 | Not Available | Negative | 1570797 - 1571630 | 30310.5 |
| thiosulfate/sulfate abc transporter substrate-binding protein cysp | ARC77_RS08425 | Not Available | Negative | 1571630 - 1572646 | 37630.6 |
| sdr family oxidoreductase ucpa | ARC77_RS08430 | Not Available | Negative | 1572804 - 1573595 | 27833.6 |
| hth-type transcriptional regulator murr | ARC77_RS08435 | Not Available | Negative | 1573724 - 1574581 | 31328.8 |
| n-acetylmuramic acid 6-phosphate etherase | ARC77_RS08440 | Not Available | Positive | 1574745 - 1575641 | 31113.7 |
| pts n-acetylmuramic acid transporter subunit iibc | ARC77_RS08445 | Not Available | Positive | 1575645 - 1577069 | 49786.0 |
| penicillin binding protein pbp4b | ARC77_RS08450 | Not Available | Positive | 1577074 - 1578378 | 47552.8 |
| porphyrinogen peroxidase | ARC77_RS08455 | Not Available | Negative | 1578436 - 1579335 | 33098.2 |
| rpoe-regulated lipoprotein | ARC77_RS08460 | Not Available | Negative | 1579431 - 1580006 | 20815.6 |
| duf2919 domain-containing protein | ARC77_RS08465 | Not Available | Negative | 1580067 - 1580516 | 17120.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





