Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine(38-40) synthase trua | ARC77_RS07905 | Not Available | Negative | 1466863 - 1467675 | 30386.2 |
| aspartate-semialdehyde dehydrogenase | ARC77_RS07910 | Not Available | Negative | 1467675 - 1468688 | 36396.2 |
| 4-phosphoerythronate dehydrogenase pdxb | ARC77_RS07915 | Not Available | Negative | 1468754 - 1469890 | 41300.0 |
| flagella biosynthesis regulator flk | ARC77_RS07920 | Not Available | Positive | 1469989 - 1470984 | 36612.4 |
| mfs transporter | ARC77_RS07925 | Not Available | Negative | 1470981 - 1472159 | 40453.7 |
| beta-ketoacyl-acp synthase i | ARC77_RS07930 | Not Available | Negative | 1472434 - 1473654 | 42615.8 |
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | ARC77_RS07935 | Not Available | Positive | 1473813 - 1475819 | 74472.4 |
| yfcl family protein | ARC77_RS07940 | Not Available | Negative | 1475940 - 1476218 | 10000.6 |
| elongation factor p hydroxylase | ARC77_RS07945 | Not Available | Negative | 1476252 - 1476800 | 21161.6 |
| sulfite exporter taue/safe family protein | ARC77_RS07950 | Not Available | Negative | 1476800 - 1477609 | 28645.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





