Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1441 family protein | ARC77_RS07545 | Not Available | Negative | 1394907 - 1395683 | 27474.1 |
| is3-like element is1203 family transposase | ARC77_RS07555 | Not Available | Positive | 1395736 - 1396949 | 46090.8 |
| duf1441 family protein | ARC77_RS07560 | Not Available | Negative | 1396993 - 1397523 | 19290.1 |
| iclr family transcriptional regulator | ARC77_RS07565 | Not Available | Negative | 1397538 - 1398320 | 28934.9 |
| nicotinamide mononucleotide deamidase-related protein yfay | ARC77_RS07570 | Not Available | Negative | 1398540 - 1399742 | 44194.2 |
| yfaz family outer membrane protein | ARC77_RS07575 | Not Available | Negative | 1399842 - 1400384 | 18596.8 |
| nucleoside triphosphatase nudi | ARC77_RS07580 | Not Available | Positive | 1400663 - 1401088 | 16343.6 |
| lipopolysaccharide core heptose(ii)-phosphate phosphatase ais | ARC77_RS07585 | Not Available | Negative | 1401127 - 1401729 | 22277.7 |
| udp-4-amino-4-deoxy-l-arabinose aminotransferase | ARC77_RS07590 | Not Available | Positive | 1402037 - 1403176 | 41653.1 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | ARC77_RS07595 | Not Available | Positive | 1403180 - 1404148 | 36339.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





