Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2138 domain-containing protein | ARC77_RS07450 | Not Available | Negative | 1367571 - 1369199 | 60432.0 |
| dna topoisomerase (atp-hydrolyzing) subunit a | ARC77_RS07455 | Not Available | Negative | 1369407 - 1372034 | 96983.3 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | ARC77_RS07460 | Not Available | Positive | 1372181 - 1372903 | 26587.0 |
| aida-i family autotransporter adhesin yfal/ehac | ARC77_RS07465 | Not Available | Negative | 1373044 - 1376796 | 131375.0 |
| protein ypab | ARC77_RS34085 | Not Available | Negative | 1377221 - 1377364 | 5280.46 |
| class 1a ribonucleoside-diphosphate reductase subunit alpha | ARC77_RS07475 | Not Available | Positive | 1377492 - 1379777 | 85703.9 |
| duf1441 family protein | ARC77_RS33550 | Not Available | Negative | 1379970 - 1380005 | 1230.42 |
| class ia ribonucleoside-diphosphate reductase subunit beta | ARC77_RS07480 | Not Available | Positive | 1380004 - 1381134 | 43519.6 |
| ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein yfae | ARC77_RS07485 | Not Available | Positive | 1381134 - 1381388 | 9275.25 |
| lipopolysaccharide kinase inaa | ARC77_RS07490 | Not Available | Negative | 1381442 - 1382092 | 25285.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





