Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinol dehydrogenase ferredoxin subunit naph | ARC77_RS07340 | Not Available | Negative | 1339112 - 1339975 | 31861.3 |
| ferredoxin-type protein napg | ARC77_RS07345 | Not Available | Negative | 1339962 - 1340657 | 24954.2 |
| periplasmic nitrate reductase subunit alpha | ARC77_RS07350 | Not Available | Negative | 1340664 - 1343150 | 93062.0 |
| chaperone napd | ARC77_RS07355 | Not Available | Negative | 1343147 - 1343410 | 9469.03 |
| ferredoxin-type protein napf | ARC77_RS07360 | Not Available | Negative | 1343400 - 1343894 | 18048.3 |
| protein yojo | ARC77_RS34080 | Not Available | Positive | 1344003 - 1344167 | 6289.74 |
| serine protease inhibitor ecotin | ARC77_RS07370 | Not Available | Positive | 1344301 - 1344789 | 18196.0 |
| malate dehydrogenase (quinone) | ARC77_RS07375 | Not Available | Negative | 1344939 - 1346585 | 60233.1 |
| microcin j25 efflux abc transporter yoji | ARC77_RS07380 | Not Available | Negative | 1346803 - 1348446 | 61584.5 |
| dna oxidative demethylase alkb | ARC77_RS07385 | Not Available | Negative | 1348522 - 1349172 | 24064.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





