Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel/cobalt efflux protein rcna | ARC77_RS06340 | Not Available | Positive | 1160220 - 1161071 | 31631.3 |
| ni(ii)/co(ii) efflux transporter accessory subunit rcnb | ARC77_RS06345 | Not Available | Positive | 1161289 - 1161627 | 12482.8 |
| fimbrial protein | ARC77_RS06350 | Not Available | Negative | 1161709 - 1162743 | 37437.8 |
| fimbrial biogenesis outer membrane usher protein | ARC77_RS06355 | Not Available | Negative | 1162754 - 1165234 | 92554.4 |
| fimbria/pilus periplasmic chaperone | ARC77_RS06360 | Not Available | Negative | 1165250 - 1165924 | 25024.5 |
| fimbrial protein | ARC77_RS06365 | Not Available | Negative | 1166012 - 1166554 | 18833.5 |
| duf2574 family protein | ARC77_RS06375 | Not Available | Negative | 1166846 - 1167127 | 10216.1 |
| iron-sulfur cluster carrier protein apbc | ARC77_RS06380 | Not Available | Negative | 1167389 - 1168498 | 39940.4 |
| methionine--trna ligase | ARC77_RS06385 | Not Available | Positive | 1168630 - 1170663 | 76258.9 |
| wgr domain-containing protein | ARC77_RS34205 | Not Available | Positive | 1170804 - 1171532 | 27563.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





