Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| radc family protein | ARC77_RS05380 | Not Available | Positive | 988847 - 989323 | 17689.4 |
| duf987 domain-containing protein | ARC77_RS05385 | Not Available | Positive | 989386 - 989607 | 8411.2 |
| type iv toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin cbea | ARC77_RS05390 | Not Available | Positive | 989681 - 990049 | 13610.2 |
| duf1441 family protein | ARC77_RS05395 | Not Available | Positive | 990138 - 990511 | 13084.8 |
| duf5983 family protein | ARC77_RS05400 | Not Available | Positive | 990508 - 990702 | 6959.16 |
| duf1441 family protein | ARC77_RS32575 | Not Available | Positive | 990748 - 990828 | 3041.76 |
| transposase domain-containing protein | ARC77_RS33750 | Not Available | Negative | 991117 - 991224 | 4160.03 |
| eutp/pduv family microcompartment system protein | ARC77_RS34200 | Not Available | Positive | 991176 - 991499 | 11776.2 |
| duf496 family protein | ARC77_RS05415 | Not Available | Negative | 991600 - 991929 | 12778.5 |
| fusc family protein | ARC77_RS05420 | Not Available | Negative | 992101 - 993159 | 39899.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





