Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stress response translation initiation inhibitor ycih | ARC77_RS03535 | Not Available | Negative | 675231 - 675557 | 11400.9 |
| orotidine-5'-phosphate decarboxylase | ARC77_RS03540 | Not Available | Negative | 675557 - 676294 | 26231.6 |
| lipopolysaccharide assembly protein lapb | ARC77_RS03545 | Not Available | Negative | 676487 - 677656 | 44533.6 |
| lipopolysaccharide assembly protein lapa | ARC77_RS03550 | Not Available | Negative | 677663 - 677971 | 11411.2 |
| phosphatidylglycerophosphatase b | ARC77_RS03555 | Not Available | Negative | 678120 - 678884 | 29022.8 |
| gtp cyclohydrolase ii | ARC77_RS03560 | Not Available | Positive | 679054 - 679644 | 21838.3 |
| aconitate hydratase acna | ARC77_RS03565 | Not Available | Negative | 679708 - 682383 | 97664.8 |
| small membrane protein ymic | ARC77_RS32450 | Not Available | Negative | 682547 - 682642 | 3822.77 |
| protein ycix | ARC77_RS03575 | Not Available | Negative | 682756 - 682923 | 6334.2 |
| ymia family putative membrane protein | ARC77_RS03580 | Not Available | Negative | 682926 - 683066 | 5337.71 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





