Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage shock protein pspa | ARC77_RS03395 | Not Available | Negative | 642349 - 643017 | 25494.4 |
| phage shock protein operon transcriptional activator | ARC77_RS03400 | Not Available | Positive | 643184 - 644161 | 36962.6 |
| 4-aminobutyrate transaminase | ARC77_RS03405 | Not Available | Negative | 644292 - 645557 | 44803.9 |
| gamma-glutamylputrescine oxidase | ARC77_RS03410 | Not Available | Negative | 645595 - 646875 | 47135.2 |
| aldehyde dehydrogenase puuc | ARC77_RS03415 | Not Available | Negative | 646877 - 648364 | 53286.3 |
| hth-type transcriptional regulator puur | ARC77_RS03420 | Not Available | Negative | 648514 - 649071 | 20106.8 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase | ARC77_RS03425 | Not Available | Negative | 649098 - 649862 | 28086.7 |
| glutamate-putrescine ligase | ARC77_RS03430 | Not Available | Positive | 650074 - 651492 | 53210.3 |
| hypothetical protein | ARC77_RS32445 | Not Available | Positive | 651641 - 651805 | 5913.2 |
| putrescine/proton symporter puup | ARC77_RS03435 | Not Available | Positive | 651795 - 653180 | 50888.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





