Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ydbh family protein | ARC77_RS03120 | Not Available | Negative | 588148 - 590787 | 96824.2 |
| d-lactate dehydrogenase | ARC77_RS03125 | Not Available | Positive | 590995 - 591984 | 36522.8 |
| heat shock protein hslj | ARC77_RS03130 | Not Available | Positive | 592095 - 592517 | 15182.6 |
| duf333 domain-containing protein | ARC77_RS03135 | Not Available | Negative | 592514 - 592780 | 8696.44 |
| pyruvate:ferredoxin (flavodoxin) oxidoreductase | ARC77_RS03140 | Not Available | Positive | 593054 - 596578 | 128785.0 |
| duf1441 family protein | ARC77_RS03145 | Not Available | Positive | 596944 - 598057 | 39843.5 |
| universal stress protein uspf | ARC77_RS03150 | Not Available | Positive | 598198 - 598632 | 15959.4 |
| trna 2-thiocytidine(32) synthetase ttca | ARC77_RS03155 | Not Available | Positive | 598808 - 599743 | 35461.8 |
| atp-dependent rna helicase dbpa | ARC77_RS03160 | Not Available | Negative | 599872 - 601245 | 49218.7 |
| protein ynal | ARC77_RS33300 | Not Available | Negative | 601278 - 601448 | 6324.73 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





