Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ydck family protein | ARC77_RS02970 | Not Available | Positive | 553528 - 554508 | 35876.4 |
| duf1441 family protein | ARC77_RS02975 | Not Available | Negative | 554503 - 555039 | 20366.4 |
| ydch family protein | ARC77_RS02980 | Not Available | Negative | 555102 - 555326 | 8945.83 |
| glucan biosynthesis protein opgd | ARC77_RS02990 | Not Available | Negative | 555466 - 557121 | 62771.2 |
| voc family protein | ARC77_RS02995 | Not Available | Negative | 557346 - 558689 | 51001.6 |
| lysr substrate-binding domain-containing protein | ARC77_RS03000 | Not Available | Positive | 558906 - 559829 | 33359.5 |
| methyl-accepting chemotaxis protein trg | ARC77_RS03005 | Not Available | Negative | 559867 - 561507 | 58936.5 |
| type i toxin-antitoxin system toxin hokb | ARC77_RS03010 | Not Available | Positive | 561906 - 562055 | 5675.23 |
| hypothetical protein | ARC77_RS33525 | Not Available | Negative | 562033 - 562101 | 2428.15 |
| hypothetical protein | ARC77_RS03015 | Not Available | Negative | 562127 - 562300 | 5830.16 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





