Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hexitol phosphatase hxpb | ARC77_RS00875 | Not Available | Negative | 163193 - 163861 | 24330.7 |
| ynib family protein | ARC77_RS00880 | Not Available | Positive | 164008 - 164544 | 20416.4 |
| fructosamine kinase family protein | ARC77_RS00885 | Not Available | Negative | 164585 - 165445 | 32476.3 |
| type v toxin-antitoxin system endoribonuclease antitoxin ghos | ARC77_RS00890 | Not Available | Negative | 165551 - 165841 | 10865.6 |
| 6-phosphofructokinase ii | ARC77_RS00895 | Not Available | Negative | 165942 - 166871 | 32457.9 |
| ydiy family protein | ARC77_RS00900 | Not Available | Positive | 167158 - 167916 | 27599.6 |
| small membrane protein ynid | ARC77_RS00905 | Not Available | Negative | 167969 - 168076 | 4115.44 |
| type iii secretion system effector espl1 | ARC77_RS00910 | Not Available | Negative | 168251 - 170149 | 70795.9 |
| threonine--trna ligase | ARC77_RS00915 | Not Available | Positive | 170672 - 172600 | 74032.5 |
| translation initiation factor if-3 | ARC77_RS00920 | Not Available | Positive | 172604 - 173146 | 20565.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





