Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative tail fiber component j | ARC77_RS28185 | Not Available | Positive | 5517466 - 5520321 | 103640.0 |
| Putative lom-like outer membrane protein | ARC77_RS28190 | Not Available | Positive | 5520389 - 5520988 | 21981.3 |
| Putative tail fiber protein | ARC77_RS28195 | Not Available | Positive | 5521140 - 5522444 | 43770.8 |
| Putative tail fiber protein | ARC77_RS28200 | Not Available | Positive | 5522446 - 5522715 | 10016.2 |
| duf1076 domain-containing protein | ARC77_RS31175 | Not Available | Positive | 5522828 - 5523402 | 20974.4 |
| Nlea4795 protein | ARC77_RS28205 | Not Available | Negative | 5523742 - 5525067 | 47639.1 |
| tyrosine-type recombinase/integrase | ARC77_RS28210 | Not Available | Negative | 5525728 - 5526722 | 36405.8 |
| Tail fiber protein | ARC77_RS33950 | Not Available | Positive | 5526716 - 5526787 | 2684.33 |
| Hypothetical protein | ARC77_RS28215 | Not Available | Positive | 5526894 - 5527805 | 33684.6 |
| t3ss effector caspase inhibitor nlef | ARC77_RS28220 | Not Available | Positive | 5527871 - 5528440 | 21389.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





