Psychrobacter alimentarius strain PAMC 27889

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Moraxellales

Family

Moraxellaceae

Genus

Psychrobacter

Description

Psychrobacter alimentarius strain PAMC 27889 is characterized by the presence of flagella, which suggests a motile nature that may aid in its adaptation to diverse environments. This strain possesses two replicons, indicating a complex genomic structure that may play a role in its metabolic versatility and survival in varying conditions. The strain is cataloged under the accession numbers NZ_CP014945.1 and NZ_CP014946.1, which provide reference points for genomic studies and further characterization. These accessions can be used by researchers to access genetic information and compare it with other strains within the Psychrobacter genus. Given its psychrophilic nature, Psychrobacter alimentarius strain PAMC 27889 is likely to thrive in cold environments, such as polar regions or deep-sea habitats. The motility conferred by its flagella may facilitate nutrient acquisition and colonization in such niches. Understanding the ecological role of this strain can provide insights into microbial life in extreme environments, as well as the potential applications of psychrophilic microorganisms in biotechnology and bioremediation.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMoraxellales
FamilyMoraxellaceae
GenusPsychrobacter
SpeciesPsychrobacter alimentarius
Strainstrain PAMC 27889

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Psychrobacter alimentarius strain PAMC 27889 plasmid pPAMC27889,

Gene Summary

Adenine Count

5234 bp

Thymine Count

5005 bp

Guanine Count

3358 bp

Cytosine Count

3308 bp

Genome Length

16905 bp

Protein-coding Genes

17 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-thrNot AvailableNot AvailablePositive587240 - 587314Not Available
duf6122 family proteinA3K91_RS14175Not AvailablePositive587525 - 58784212400.7
elongation factor tuA3K91_RS02490Not AvailablePositive588117 - 58930743077.4
ribosomal protein s18-alanine n-acetyltransferaseA3K91_RS02495Not AvailablePositive589636 - 59012718768.5
merr family transcriptional regulatorA3K91_RS02500Not AvailableNegative590156 - 59063818277.7
leucyl/phenylalanyl-trna--protein transferaseA3K91_RS02505Q4FUQ3Negative590686 - 59148329723.3
thioredoxin-disulfide reductaseA3K91_RS02510Q9KSS4Negative591484 - 59250636439.0
dna translocase ftskA3K91_RS02515Q9I0M3Positive593046 - 596348119298.0
amidaseA3K91_RS02520P13398Positive596734 - 59822753193.4
class iii extradiol ring-cleavage dioxygenaseA3K91_RS02525P24197Negative598258 - 59916033232.6

Displaying genes 511 – 520 of 2789 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.