Psychrobacter alimentarius strain PAMC 27889

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Moraxellales

Family

Moraxellaceae

Genus

Psychrobacter

Description

Psychrobacter alimentarius strain PAMC 27889 is characterized by the presence of flagella, which suggests a motile nature that may aid in its adaptation to diverse environments. This strain possesses two replicons, indicating a complex genomic structure that may play a role in its metabolic versatility and survival in varying conditions. The strain is cataloged under the accession numbers NZ_CP014945.1 and NZ_CP014946.1, which provide reference points for genomic studies and further characterization. These accessions can be used by researchers to access genetic information and compare it with other strains within the Psychrobacter genus. Given its psychrophilic nature, Psychrobacter alimentarius strain PAMC 27889 is likely to thrive in cold environments, such as polar regions or deep-sea habitats. The motility conferred by its flagella may facilitate nutrient acquisition and colonization in such niches. Understanding the ecological role of this strain can provide insights into microbial life in extreme environments, as well as the potential applications of psychrophilic microorganisms in biotechnology and bioremediation.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMoraxellales
FamilyMoraxellaceae
GenusPsychrobacter
SpeciesPsychrobacter alimentarius
Strainstrain PAMC 27889

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Psychrobacter alimentarius strain PAMC 27889 plasmid pPAMC27889,

Gene Summary

Adenine Count

5234 bp

Thymine Count

5005 bp

Guanine Count

3358 bp

Cytosine Count

3308 bp

Genome Length

16905 bp

Protein-coding Genes

17 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
integration host factor subunit alphaA3K91_RS12765Q4FQ67Negative3091993 - 309229211261.4
phenylalanine--trna ligase subunit betaA3K91_RS12770Q4FQ66Negative3092550 - 309495587805.2
phenylalanine--trna ligase subunit alphaA3K91_RS12775Q4FQ65Negative3095059 - 309611439729.5
50s ribosomal protein l20A3K91_RS12780Q4FQ64Negative3096417 - 309677313521.7
50s ribosomal protein l35A3K91_RS12785Q1Q8C5Negative3096893 - 30970907585.68
thioesterase family proteinA3K91_RS12790Not AvailablePositive3097520 - 309796317091.6
bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisieA3K91_RS12795Q48PJ7Positive3098083 - 309891930947.2
sec-independent protein translocase subunit tataA3K91_RS12800Q4FQ61Positive3099117 - 30993899776.55
sec-independent protein translocase protein tatbA3K91_RS12805Not AvailablePositive3099440 - 310004823069.3
twin-arginine translocase subunit tatcA3K91_RS12810Not AvailablePositive3100048 - 310093533131.6

Displaying genes 2581 – 2590 of 2789 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.