Psychrobacter alimentarius strain PAMC 27889

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Moraxellales

Family

Moraxellaceae

Genus

Psychrobacter

Description

Psychrobacter alimentarius strain PAMC 27889 is characterized by the presence of flagella, which suggests a motile nature that may aid in its adaptation to diverse environments. This strain possesses two replicons, indicating a complex genomic structure that may play a role in its metabolic versatility and survival in varying conditions. The strain is cataloged under the accession numbers NZ_CP014945.1 and NZ_CP014946.1, which provide reference points for genomic studies and further characterization. These accessions can be used by researchers to access genetic information and compare it with other strains within the Psychrobacter genus. Given its psychrophilic nature, Psychrobacter alimentarius strain PAMC 27889 is likely to thrive in cold environments, such as polar regions or deep-sea habitats. The motility conferred by its flagella may facilitate nutrient acquisition and colonization in such niches. Understanding the ecological role of this strain can provide insights into microbial life in extreme environments, as well as the potential applications of psychrophilic microorganisms in biotechnology and bioremediation.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMoraxellales
FamilyMoraxellaceae
GenusPsychrobacter
SpeciesPsychrobacter alimentarius
Strainstrain PAMC 27889

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Psychrobacter alimentarius strain PAMC 27889 plasmid pPAMC27889,

Gene Summary

Adenine Count

5234 bp

Thymine Count

5005 bp

Guanine Count

3358 bp

Cytosine Count

3308 bp

Genome Length

16905 bp

Protein-coding Genes

17 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
riboflavin biosynthesis protein ribfA3K91_RS11365P0AG42Positive2760623 - 276165737484.9
duf2789 domain-containing proteinA3K91_RS11370Not AvailableNegative2761775 - 27620149199.55
malate dehydrogenaseA3K91_RS11375Q4FQU7Negative2762246 - 276323535442.0
hypothetical proteinA3K91_RS11380Not AvailableNegative2763603 - 276430725588.1
lytic transglycosylase domain-containing proteinA3K91_RS11385Not AvailableNegative2764796 - 276694980455.7
trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miabA3K91_RS11390Q1Q929Positive2767294 - 276878755335.8
sdr family oxidoreductaseA3K91_RS11395Q6WVP7Negative2768856 - 276969529986.5
hypothetical proteinA3K91_RS11400Not AvailableNegative2769959 - 27701959130.14
rtcb family proteinA3K91_RS11405P46850Negative2770329 - 277154344246.6
lyse family translocatorA3K91_RS11410P38102Negative2772303 - 277303126404.4

Displaying genes 2301 – 2310 of 2789 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.